Insertion junction: CLIP2.067171_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.067171
Chromosome:chromosome 3
Location:1751197
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g153600 (1 of 1) IPR000104//IPR003034//IPR022656 - Antifreeze protein, type I // SAP domain // XPA C- terminal 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATTTTAGGGTGTGTGCAGCCTCCGAGGATGTGCCCTCCGGAGTCAGGG
Internal bar code:TTGACCGCTCCGAAGCCTTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2121
LEAP-Seq percent confirming:98.6842
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCACACGTGTCATGCGTA
Suggested primer 2:TCGGAAGACTGAACACCGTG