Insertion junction: CLIP2.067177_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.067177
Chromosome:chromosome 12
Location:243767
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g485150 GAP1a,GAP1,GAPC1 (1 of 2) 1.2.1.12 - Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) / Triosephosphate dehydrogenase; Glyceraldehyde 3-phosphate dehydrogenase, GAPC, chloroplastic 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTCACGATGGCCCTCCTCGCCCAGCGCTCTGTGAACGCCTCCGCGCGT
Internal bar code:CGGCGTAATCTCTACATGCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:158
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTTGATCTTGCTCGGGT
Suggested primer 2:TGGCACTTGTGATGTACCCC