Insertion junction: CLIP2.067182_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067182
Chromosome:chromosome 2
Location:1436511
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre02.g083550 (1 of 1) PF01494//PF05834 - FAD binding domain (FAD_binding_3) // Lycopene cyclase protein (Lycopene_cycl) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCCAACTCCCCCAATCCCCCCCCGGCCGCCCTGTGCTTTGCCCCCAG
Internal bar code:GCGGGTCGGGGCTTGGTATAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:432
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACCTACACACATGCACC
Suggested primer 2:GTTGTGTGTGTGTACCGTGC