Insertion junction: CLIP2.067188_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067188
Chromosome:chromosome 5
Location:955769
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g246950 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGATGCTGTCGATAACTGGGAACTCAGCGCGTTCACTGGGTGTTGTAAG
Internal bar code:CGTGGCGGCGGGTACGTAGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1616
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTATGCGCATGTCGGCAT
Suggested primer 2:GGTCTCGGGTTACTGAACGG