Insertion junction: CLIP2.067193_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067193
Chromosome:chromosome 3
Location:6134456
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g190650 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAATGCGCATGTCAGGTGCCGGGGAGAGAACCTTACAGACAGAGGCGGT
Internal bar code:ACCAATTGTCGTCTAGGGGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:5185
LEAP-Seq percent confirming:74.1379
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:116

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCCTTGCATTACCGAATG
Suggested primer 2:TACTTGACGCCGTGGAAGAC