Insertion junction: CLIP2.067193_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.067193
Chromosome:chromosome 3
Location:6134469
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g190650 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAATAATGCCCACCCTGCACACCGTGCACACGGACAGGAGCGTCTTGCT
Internal bar code:ACCAATTGTCGTCTAGGGGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1968
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TACTTGACGCCGTGGAAGAC
Suggested primer 2:CCGCCTTGCATTACCGAATG