Insertion junction: CLIP2.067195_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.067195
Chromosome:chromosome 14
Location:1476393
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g617350 (1 of 7) PF00415//PF13540 - Regulator of chromosome condensation (RCC1) repeat (RCC1) // Regulator of chromosome condensation (RCC1) repeat (RCC1_2) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTTCATGCACACCTATGCACAATGGACCTGGCTCGCATCCCAGCACGA
Internal bar code:TTATATTGTGTGTGCATGTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1162
LEAP-Seq percent confirming:70.7317
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGCGTCGTGAACTTTCAT
Suggested primer 2:ATTGGGCAGTCGGACGATTT