Insertion junction: CLIP2.067207_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.067207
Chromosome:chromosome 17
Location:1352513
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g705843 Chlamydomonas-specific family W protein; (1 of 6) PF06701 - Mib_herc2 (MIB_HERC2) 5'UTR_intron
Cre17.g705850 GGK2,PROB2 Glutamate 5-kinase; (1 of 3) 2.7.2.11 - Glutamate 5-kinase / Gamma-glutamyl kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGACAGCCGCGCAACAAAACATACCTTAAGTGAAAAACCTTGAGCGA
Internal bar code:AACGTGCTTTTGATGAAGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1645
LEAP-Seq percent confirming:29.7872
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCCGTTGCGTCGTCTTA
Suggested primer 2:GTACGGTATGCGGAAGGAGG