Insertion junction: CLIP2.067209_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.067209
Chromosome:chromosome 9
Location:3597805
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396772 Similar to Gametolysin and Autolysin; (1 of 4) IPR003882//IPR008752 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCACCTGGCATGGGGGTCAACTCTGTAAATGTTTCATTCGCTGAAAG
Internal bar code:TTCTGGATAAGTCCGTGGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:577
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGATTCACCCCCTGCATT
Suggested primer 2:TATGTGCGTGTCAGGCATGT