Insertion junction: CLIP2.067210_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067210
Chromosome:plastome
Location:74397
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802293 orf202 Wendy transposon CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATCACTGCGTGATAATAATAATAATAACTACCTAAAAACAAACCAGTT
Internal bar code:CTTCATCGCACCTACAAATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:202
LEAP-Seq percent confirming:22.314
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:94
LEAP-Seq n unique pos:121

Suggested primers for confirmation by PCR

Suggested primer 1:GACACCTCCCTTTCACGGAG
Suggested primer 2:GCGGTGCAGCTTGTGTTTTA