Insertion junction: CLIP2.067219_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.067219
Chromosome:chromosome 8
Location:846107
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g800899 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATTTAATCATTTTAGTTTGGGCTGGCCGCTATCTACAACCCACCTTC
Internal bar code:TAATGATGTCGGAGAATGTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:215
LEAP-Seq percent confirming:15.625
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:54
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCAACTCTCAGTGCACTA
Suggested primer 2:CCTTACTCTGTGCGGCTCAA