Insertion junction: CLIP2.067221_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067221
Chromosome:chromosome 13
Location:3762308
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588750 (1 of 14) PF04577 - Protein of unknown function (DUF563) (DUF563) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTTCAACAACAACCCGTGCTGCGGCCCACTGCATTCAGCTGCAGTGCT
Internal bar code:ATGAGGTGACTCTGTTAGATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:745
LEAP-Seq percent confirming:82.8571
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCCCTGCCTGCTTATCT
Suggested primer 2:CTGCGTCTTCCATGGTCTGT