Insertion junction: CLIP2.067221_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067221
Chromosome:chromosome 13
Location:3762310
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588750 (1 of 14) PF04577 - Protein of unknown function (DUF563) (DUF563) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGAAGGCTTGTTCGGACGGATGGGCGCTGGTGAAGAAAGAGGCGCCCG
Internal bar code:ATGAGGTGACTCTGTTAGATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2464
LEAP-Seq percent confirming:61.1111
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:42
LEAP-Seq n unique pos:108

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCGTCTTCCATGGTCTGT
Suggested primer 2:TCCTCCCTGCCTGCTTATCT