Insertion junction: CLIP2.067231_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067231
Chromosome:chromosome 2
Location:5378626
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800236 (1 of 2) 6.1.1.21 - Histidine--tRNA ligase / Histidyl-tRNA synthetase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATCCCTCATTTGCCCAGGTTTCCCCGCGACACACCACCAACAATTCAG
Internal bar code:AGTTGTACGGCCAGGCGTCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1991
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCGCGTAAACACACACA
Suggested primer 2:CTCAGTGTGCCCGTGTGTAT