Insertion junction: CLIP2.067232_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067232
Chromosome:chromosome 3
Location:2101703
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g156550 (1 of 1) PTHR22829//PTHR34826 - DEP DOMAIN PROTEIN // FAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACATGTTGATGTTTGAGTTGAGGGAAGGAATGCCAAGGCGGCTGTGAG
Internal bar code:CCGGGTTTAACATTTCTACAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1438
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGAGTTGGTTGCGGAGG
Suggested primer 2:CTATCTCCTTAGCCGCTGCC