Insertion junction: CLIP2.067238_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.067238
Chromosome:chromosome 12
Location:5682629
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g531950 (1 of 4) PTHR10217//PTHR10217:SF509 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CNG CHANNEL-LIKE, ISOFORM E 5'UTR
Cre12.g532000 (1 of 3) PF04359 - Protein of unknown function (DUF493) (DUF493) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTCACAAAACCCTTAAATTGTAACAAAGTAGCACACTGCGTTATGGCG
Internal bar code:AGTGTTGCAAGACATATTGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2868
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGCGGCATAGTAACTTG
Suggested primer 2:AGAAGCGCAACACTACGTCA