Insertion junction: CLIP2.067239_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067239
Chromosome:chromosome 12
Location:9823963
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g546877 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGCTTTGGAAAGACATTGGGTAGCACTGTGATTGTCACAGTATGATA
Internal bar code:TTTATCGAGCGGGAAGCCAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:881
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCGGCGTACTATAAGTGT
Suggested primer 2:CAACGACTGCCTCAGGTCAG