Insertion junction: CLIP2.067248_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.067248
Chromosome:chromosome 11
Location:2814592
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g801299 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTTCAATGCATGCCGGTAATTACTCCGACCTCAACTTGCCACCCGTT
Internal bar code:CGATAGCCTAACGGGTTGTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1128
LEAP-Seq percent confirming:5.88235
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCAAGACCGTTCCTTCC
Suggested primer 2:CGGAGATGGAGGACGTGATG