Insertion junction: CLIP2.067253_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.067253
Chromosome:chromosome 10
Location:4153462
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g448850 FAP135,ODA5AK,CAL5 (1 of 3) 3.4.22.54 - Calpain-3 / Muscle-specific calcium-activated neutral protease 3; Calpain-Like Flagellar Associated Protein 135 3'UTR
Cre10.g448900 (1 of 80) IPR003882 - Pistil-specific extensin-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACATCCGATAGACGCCTCAAGCCTGGCGACCTCCACCCAGCACATTACA
Internal bar code:GGCTATTTTGGCGGCTAGGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:656
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TAGTGCCTGCCTACCAAAGC
Suggested primer 2:CTGGAGAATGTGCTCACCGT