Insertion junction: CLIP2.067254_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.067254
Chromosome:chromosome 6
Location:3089957
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275200 3'UTR
Cre06.g275250 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGAAATACGGGACTGTACTGACAGCGGTTAGTGACTGCACGTATTAC
Internal bar code:CTTGTGGGTCCCATTCAATAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2619
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAGTTGCAGCAGGAAAC
Suggested primer 2:CAGTGTGGAGGTGTCAGGTC