Insertion junction: CLIP2.067261_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.067261
Chromosome:chromosome 1
Location:6161700
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043817 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGACGCACCAATGCCTTGTCCCTTCTTGCTACGCATTTATGTGGGCAC
Internal bar code:TAACTAGTCGATCCGTTATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:729
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTGGGTGTACTTCTTGCC
Suggested primer 2:CTCGGAAACAACACCTCGGA