Insertion junction: CLIP2.067261_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.067261
Chromosome:chromosome 1
Location:6161708
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043817 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTACTGTACCGACGGTAGCTGGCAGGTTGTGTCGATGTTTTGCTGACGC
Internal bar code:TAACTAGTCGATCCGTTATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4551
LEAP-Seq percent confirming:78.6667
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGGAAACAACACCTCGGA
Suggested primer 2:TCGTGGGTGTACTTCTTGCC