Insertion junction: CLIP2.067268_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067268
Chromosome:chromosome 12
Location:8485297
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549600 (1 of 96) IPR019734 - Tetratricopeptide repeat 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCGCACTCGGGCCTCAGGGTTGGCAGGGGTTCGTGCCGTGTTCGGCTG
Internal bar code:AAAGGGATGTATCGTTCATTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:245
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGGCATGAATCAAATCGC
Suggested primer 2:TATCCAACCCGCCTAGACCA