Insertion junction: CLIP2.067271_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067271
Chromosome:chromosome 3
Location:1556247
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g152150 (1 of 1) IPR007087//IPR013087//IPR015880 - Zinc finger, C2H2 // Zinc finger C2H2-type/integrase DNA-binding domain // Zinc finger, C2H2-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCGCAGCTGGTGTGCGCAGCACGCCGCCACTTGTCCGATCCTCTCACG
Internal bar code:TCAGCTTCTGGCGGGCTAGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1709
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GGACACTGGAGCTGACTGAC
Suggested primer 2:GCATCTACTACGACCCCACG