Insertion junction: CLIP2.067271_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067271
Chromosome:chromosome 3
Location:1556260
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g152150 (1 of 1) IPR007087//IPR013087//IPR015880 - Zinc finger, C2H2 // Zinc finger C2H2-type/integrase DNA-binding domain // Zinc finger, C2H2-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGATGGGCGGGACTTGAGCTGTGGCAGTGGGAAGGCTGCGGCACCTG
Internal bar code:GCAGTAGTGTTGTGGGTTAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2300
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCATCTACTACGACCCCACG
Suggested primer 2:GGACACTGGAGCTGACTGAC