Insertion junction: CLIP2.067272_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067272
Chromosome:chromosome 17
Location:3840429
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727450 (1 of 14) PF00566 - Rab-GTPase-TBC domain (RabGAP-TBC) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAGGCGGTCATTGTCCGGAGGTCCGAGGCTCTCGTACTCGCAGCGTTC
Internal bar code:ATCGCAGTCTTTATTACGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1041
LEAP-Seq percent confirming:90.625
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGGTGTTCCGTGTGGGTC
Suggested primer 2:CACAGTCACTTTTGCCACCG