Insertion junction: CLIP2.067273_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067273
Chromosome:chromosome 1
Location:3061306
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g800063 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAACTGCACTGCGCTGACGCTACACCAATGCCACGGGTACAGGTGCTG
Internal bar code:TGTATAGTTAGGGAAGGAACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1721
LEAP-Seq percent confirming:5.55556
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGGGAGGGTAGAGTGAGT
Suggested primer 2:GGCAGTGAAGACGATGACCA