Insertion junction: CLIP2.067288_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067288
Chromosome:chromosome 16
Location:6995920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g802000 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCCGTACCCAACCTACCGCCCACTACCCAAGACCTCCACTTTCCCCA
Internal bar code:AGCTTCTTAGCGCGTTTCCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1062
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTTCTGTGCGCTTGTACT
Suggested primer 2:GGGTAAAGGGGGAGTTGGTG