Insertion junction: CLIP2.067293_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067293
Chromosome:chromosome 13
Location:959101
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre13.g568176 (1 of 5) IPR001005//IPR009057//IPR017877 - SANT/Myb domain // Homeodomain-like // Myb-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATATTTATGCGAGTTTTCGGAGGCTATCCATTACTGGCAAATTTCAGCC
Internal bar code:GGTCCCAGAATTTAACCGAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1005
LEAP-Seq percent confirming:32.8125
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:AACACTGCCTAGTCGCTCAC
Suggested primer 2:CATAGCATGCGTGTCAAGCC