Insertion junction: CLIP2.067294_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.067294
Chromosome:chromosome 16
Location:2354967
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g659150 (1 of 7) PF00076//PF14259 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGACCGCAGCACATGCACCATTTACCATCAGCGTGGCGGGTCGCAAAG
Internal bar code:CCGCCGACGTTGATTCTCAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:789
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGTACGCTGTTTATGCTG
Suggested primer 2:GCAGCTGGAACATGTTGTCG