Insertion junction: CLIP2.067296_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.067296
Chromosome:chromosome 13
Location:2681772
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre13.g581500 OPR41 OctotricoPeptide Repeat protein 41 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTGCTGCAGCATGTGCATAGTGTAGGCGCTCTGCAGCAGCGCCACGC
Internal bar code:GTTATATTGTTGGGTGTCTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:719
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCTTACGCGCTGCTAACA
Suggested primer 2:CGTGGTAATGTGTGGCTCCT