Insertion junction: CLIP2.067301_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.067301
Chromosome:chromosome 10
Location:5124467
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g455300 SMP1 (1 of 1) K11088 - small nuclear ribonucleoprotein D3 (SNRPD3, SMD3); Small nuclear ribonucleoprotein SmD3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCTTCACCGCCCAAAGCGTGCACGCCGCGCCTCATGCATGCGCGTGCA
Internal bar code:TCGGGACTAGCTATCTTTTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2941
LEAP-Seq percent confirming:98.4848
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGATGTACCGTGGCGAG
Suggested primer 2:TGCATTGTGGTGTTGCATGG