Insertion junction: CLIP2.067301_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.067301
Chromosome:chromosome 10
Location:5124477
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g455300 SMP1 (1 of 1) K11088 - small nuclear ribonucleoprotein D3 (SNRPD3, SMD3); Small nuclear ribonucleoprotein SmD3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCACAGACTGTCTTTGTGTCTGCATGCGCATGTAATGCTCATGGATCC
Internal bar code:TCGGGACTAGCTATCTTTTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:507
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATTGTGGTGTTGCATGG
Suggested primer 2:GAGAGATGTACCGTGGCGAG