Insertion junction: CLIP2.067308_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067308
Chromosome:chromosome 12
Location:7714719
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g554929 5'UTR
Cre12.g555001 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTACCATGTTGCTCACCTCCAATAAACAGCTGCATTCTGTGTCAGCT
Internal bar code:TAGGTGTGCTGTATTCAATTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:343
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATCACTAGCACCATCTGGCG
Suggested primer 2:CAAAGGCTCCTCATGCTCGA