Insertion junction: CLIP2.067310_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.067310
Chromosome:chromosome 14
Location:1271265
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g616250 PCD4,CPL9 Conserved in the Plant Lineage; (1 of 1) PTHR33824//PTHR33824:SF3 - FAMILY NOT NAMED // POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN-RELATED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCAGCTGGCAGCGCGCGCCTCTTGAGCTCCCATTTTGCATCTGTATG
Internal bar code:CTAGCTTTGCCTGGCGCAACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:665
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TTACAGTGTCTTTCGCGCCT
Suggested primer 2:CATACATGCATGCCCTTGCC