Insertion junction: CLIP2.067316_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.067316
Chromosome:chromosome 10
Location:738728
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g422550 (1 of 274) IPR020683 - Ankyrin repeat-containing domain 5'UTR
Cre10.g422600 NUO6 NADH:ubiquinone oxidoreductase 51 kDa subunit; (1 of 1) K03942 - NADH dehydrogenase (ubiquinone) flavoprotein 1 (NDUFV1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGACTGAAAAGGCTAGGTCGCTGGCGTAGTGGCGTAGGGTTTGGGGA
Internal bar code:GGCACGGCTAGCGAGAATGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1433
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CAGACGTGGACTCGGTTTCA
Suggested primer 2:GGTGCTGTACTCTGTGTGCT