Insertion junction: CLIP2.067319_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.067319
Chromosome:chromosome 5
Location:2063699
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre05.g236700 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCTGCTCGCGGATTGCGACATGCAGGATGCGGTCTTGCATGGCCAGC
Internal bar code:TTTTTGACTACAATGTATTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:389
LEAP-Seq percent confirming:6.25
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGCAGGGACTTCAGGAG
Suggested primer 2:ACCTGTGTGTGTGTGTGTGT