Insertion junction: CLIP2.067323_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067323
Chromosome:chromosome 11
Location:2569473
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095092 PSY1 Phytoene synthase; (1 of 1) K02291 - phytoene synthase (crtB) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTCCGTAAACACCAGCCCGCAGCGGGCGTGAGGCAACGCTCGACGGGG
Internal bar code:GTAGAGAAGGTCGGTTGTGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2482
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ATGACCTGCAACACCGCATA
Suggested primer 2:TTCCTTTCCACGTCGTCCAG