Insertion junction: CLIP2.067326_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.067326
Chromosome:chromosome 6
Location:8733010
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g310601 TNP19 putative transposase; (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATCCGCACTTGCTACATGAACGCTGCACCTGCCACATCCCTCGGCGCA
Internal bar code:ATCGATCGCGCCACGTTGTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3294
LEAP-Seq percent confirming:77.4194
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTGCGGATTTCCATCGGT
Suggested primer 2:TAGTGCGGTTTGCTGTACGT