Insertion junction: CLIP2.067326_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.067326
Chromosome:chromosome 6
Location:8733064
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g310601 TNP19 putative transposase; (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAGTCAGGTTCAGGGTTCAGTAGACGTGGACGCTGAGTGCGGCTGAGT
Internal bar code:GATGAAAGGTTTGCAATACACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1243
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TAGTGCGGTTTGCTGTACGT
Suggested primer 2:AAGTGCGGATTTCCATCGGT