Insertion junction: CLIP2.067332_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.067332
Chromosome:chromosome 14
Location:3094458
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g628200 (1 of 1) IPR000719//IPR001245//IPR002290//IPR003018//IPR011009//IPR020635//IPR029016 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // GAF domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // GAF domain-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACTAATATGAGTCGCATCTGTCTTTGGTGGGCACCCGCACAGCGCAGT
Internal bar code:AATGGACAACGTTGCGTGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1734
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGTTAACAGGGCGTATTG
Suggested primer 2:GGTGTGCCTTGCAGTTTGAG