Insertion junction: CLIP2.067338_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067338
Chromosome:chromosome 3
Location:2582559
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160150 (1 of 35) IPR016135 - Ubiquitin-conjugating enzyme/RWD-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTTGCAGTATGTAGGAGGCGGCCATGACACTCCCCTCACATTGCTGG
Internal bar code:CGCAGGAACGGATAGATTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4801
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:232
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:232

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTCTTATCCTGGGGGCCT
Suggested primer 2:TTTTGTAGTTGCGCCAGTGC