Insertion junction: CLIP2.067344_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.067344
Chromosome:chromosome 4
Location:780821
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g217966 (1 of 226) IPR012337 - Ribonuclease H-like domain intron
Cre04.g800447 (1 of 1) PTHR32166:SF33 - HAT FAMILY DIMERIZATION DOMAIN-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCGCGAAGAAGAGTAGCAGAGTGAAGTGCCGAGACATGCCCGAAGGT
Internal bar code:CGGGTCGCATATTTTGTGCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:131
LEAP-Seq percent confirming:13.3333
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAGCAATGGTTGGCGTTG
Suggested primer 2:TTGTTGCGAAACGTCTGCAG