Insertion junction: CLIP2.067344_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.067344
Chromosome:chromosome 9
Location:1763575
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g398200 (1 of 1) PTHR23244//PTHR23244:SF304 - KELCH REPEAT DOMAIN // KELCH DOMAIN-CONTAINING PROTEIN 4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGTGCGGCAGAGTGGTCCGCAGTCCTATGCAACTGCAATGTCGATTT
Internal bar code:CAACATAGAATATCTCTTGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:173
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGAAACGCATGGAGGTCT
Suggested primer 2:GTGTAGGGAGTGTCCTTGCC