Insertion junction: CLIP2.067349_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.067349
Chromosome:chromosome 1
Location:4062612
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800080 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCATGCGAAGGGTCTGTTCTGTGCTCTCCGGGTTGACTCTTTTTAATG
Internal bar code:CAGGGTCCTTCTTAGTCGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1166
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTTGCATTACGCTAGTGC
Suggested primer 2:TGCAGAGACGGCAAATCCAT