Insertion junction: CLIP2.067358_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.067358
Chromosome:chromosome 16
Location:243179
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694500 CGL57,DNJ37 (1 of 1) PTHR24078//PTHR24078:SF190 - DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED; DnaJ-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTCAGACAGCGGCTCCCGATGTACCATATCCGCATGGACGGACGCTG
Internal bar code:ACTAAAGGGAGTCAGATTAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2545
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TATCAACGCTCATCTCCGCC
Suggested primer 2:AGCAACAGCTACAGCCTGAG