Insertion junction: CLIP2.067359_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.067359
Chromosome:chromosome 3
Location:5278425
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g182450 (1 of 3) 1.5.1.5//3.5.4.9 - Methylenetetrahydrofolate dehydrogenase (NADP(+)) // Methenyltetrahydrofolate cyclohydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCATACATCCACTGAAACTTCACGCAGCACTAACCCGCCCTCGGCAGT
Internal bar code:GTACTCGGAAGATGGGTTGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1812
LEAP-Seq percent confirming:38.7097
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGGCTTGCAGGAATGTA
Suggested primer 2:TATGGAGGGGTGTGAGGGAG