Insertion junction: CLIP2.067368_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.067368
Chromosome:chromosome 9
Location:804461
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403850 (1 of 30) PTHR24349:SF79 - NITROGEN NETWORK KINASE 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTATGCACATCGATTTGTGATTGCGTCCCTCCAGACCCACTCGAGTCG
Internal bar code:GAATTCCCCACGGTGTAGAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4827
LEAP-Seq percent confirming:98.1132
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGAGAGGGCGTTGACAAC
Suggested primer 2:TGAAACGGGAAGGACACTCG