Insertion junction: CLIP2.067368_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.067368
Chromosome:chromosome 9
Location:804461
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403850 (1 of 30) PTHR24349:SF79 - NITROGEN NETWORK KINASE 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGATGAGTGTACTCCAGTATGGCAGCACACTAAACAGAGGCCTGCGC
Internal bar code:GAATTCCCCACGGTGTAGAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2044
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAACGGGAAGGACACTCG
Suggested primer 2:TCAGAGAGGGCGTTGACAAC