Insertion junction: CLIP2.067374_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.067374
Chromosome:chromosome 16
Location:5356568
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683500 HEL64 (1 of 1) K14778 - ATP-dependent RNA helicase DDX49/DBP8 [EC:3.6.4.13] (DDX49, DBP8); DEAD/DEAH box helicase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGTGTGATGAGGGAAGTGCAGGCTGTGTTGCGGTGGGGTGCACGGTGC
Internal bar code:ATGCGTTACTAGGAGCCCAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1345
LEAP-Seq percent confirming:70.9677
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CGTAGCTAGGTAAGGCAGGC
Suggested primer 2:ACCAGCCCAAACTGAACCAA